Any COVID-19 AIRR-Seq data?

[antonkulaga]

I wonder if there are any COVID-19 AIRR-Seq data availible?

[SimonettiFR]

Some data from BAL samples in individuals with mild versus severe COVID19 disease. scTCR-seq data, pathogen specific data though.

The landscape of lung bronchoalveolar immune cells in COVID-19 revealed by...

[caschramm]

I’m aware of several groups getting B cell data, but I don’t think anything is publicly available yet.

[Brian_Corrie]

Please let us know if you find any such public data… We are happy to host the AIRR-seq data and its relevant Study/Subject/Sample metadata in an AIRR compliant repository for people to search… We have one sitting ready to go, empty of data 8-(

http://covid19.ireceptor.org/

[Brian_Corrie]

FYI - AIRR Community statement around sharing of data…

COVID-19 Demands Increased Public Sharing of Biomedical Research Data - The...

[Brian_Corrie]

We have created a page to curate papers that have COVID-19 AIRR-seq data (and where to find the data)… All we need now is some data

Publicly available COVID-19 AIRR-seq data sets

The AIRR Community (www.airr-community.org) has created this page to provide a central location for finding and tracking research that is producing (or planning on producing) COVID-19 AIRR-seq data sets. The page provides links to the papers and the sources for the sequence data (SRA, ENA, etc.). If annotated AIRR-seq data are available, links to the sources for those data sets are also available (e.g. iReceptor, ImmunoAccess, Observer Antibody Space, etc.). If you know of papers that have such …