Publication TBD
- ENA Accession: PRJEB11483 (secondary accession: ERP012877)
Published
- Banerjee, S et al. Evaluation of a novel multi-immunogen vaccine strategy for targeting 4E10/10E8 neutralizing epitopes on HIV-1 gp41 membrane proximal external region. Virology 505:113-26 (2017).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA355270
- Species: Oryctolagus cuniculus
- Illumina MiSeq 2x250, mRNA
- Bashford-Rogers, RJ et al. Network properties derived from deep sequencing of human B-cell receptor repertoires delineate B-cell populations. Genome Res 23:1874–84 (2013).
[PubMed] [PMC] [DOI]- ENA Study: PRJEB1289
- Species: Homo sapiens
- Roche 454, mRNA
- The publication also states Illumina MiSeq 2x250, but I cannot locate this data.
- Bhiman, J.N. et al. Viral variant that initiate and drive maturation of VIV2-directed HIV-1 broadly neutralising antibodies. Nat Med. 21(11):1332 (2015).
[PubMed] [DOI]- SRA Accession: SRR2126754, SRR2126755
- Roche 454, mRNA
- Bolland, DJ et al. Two Mutually Exclusive Local Chromatin States Drive Efficient V(D)J Recombination. Cell Rep 15:2475-87 (2016).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA318060
- Species: Mus musculus
- Illumina HiSeq 1000, gDNA
- Bonsignori, M et al. Maturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody. Cell 165:449-63 (2016).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA304166
- Species: Homo sapiens
- Roche 454, gDNA
- Boyd, SD et al. Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing. Sci Transl Med 1:12ra23 (2009).
[PubMed] [PMC] [DOI]- SRA Accession: SRP001460
- Species: Homo sapiens
- Roche 454, gDNA
- Britanova, O. V et al. Age-related decrease in TCR repertoire diversity measured with deep and normalized sequence profiling. J. Immunol. 192, 2689–98 (2014).
- BioProject Accession: PRJNA273698
- Illumina HiSeq2000 2x100, mRNA, 5’RACE, UMI
- Britanova, O. V. et al. Dynamics of Individual T Cell Repertoires: From Cord Blood to Centenarians. J. Immunol. (2016).
- BioProject Accession: PRJNA316572
- Illumina HiSeq2500 2x100, mRNA, 5’RACE, UMI
- Data from Britanova et al. 2014 is a subset of this dataset
- Chang, Y.-H. et al. Network Signatures of IgG Immune Repertoires in Hepatitis B Associated Chronic Infection and Vaccination Responses. Sci. Rep. 6, 26556 (2016).
- ENA Accession: PRJEB9332
- Illumina NextSeq 2x150, mRNA
- Chen, Z. et al. T cell receptor b-chain repertoire analysis reveals intratumour heterogeneity of tumour-infiltrating lymphocytes in oesophageal squamous cell carcinoma. J. Pathol. 4, 450 (2016).
[DOI]- SRA Accession: SRP072206
- Illumina HiSeq 2000, mRNA
- Collins, A. M. et al. The mouse antibody heavy chain repertoire is germline-focused and highly variable between inbred strains. Philos. Trans. R. Soc. B Biol. Sci. 370, 20140236 (2015).
[PubMed] [PMC] [DOI]- ENA Accession: PRJEB8745
- Species: Mus musculus
- Roche 454, mRNA
- Corcoran, M.M. et al. Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity. Nat. Commun. 7, 13642 (2016).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJEB15295
- Species: Macaca mulatta, Mus musculus
- MiSeq 2x300bp, mRNA
- Cui, A. et al. A Model of Somatic Hypermutation Targeting in Mice Based on High-Throughput Ig Sequencing Data. J. Immunol. 197, 3566–3574 (2016).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA283640
- Species: Mus musculus
- Illumina MiSeq 2x300, mRNA, 5’RACE, 17bp UMI
- Davey, M.S. et al. Clonal selection in the human Vdelta1 Tcell repertoire indicates gd-TCR dependent adaptive immune surveillance. Nature Comm. 8, 14760 (2017).
[DOI]- SRA Accession: SRP096009
- Illumina MiSeq, cDNA
- de Bourcy, C et al. Dynamics of the human antibody repertoire after B cell depletion in systemic sclerosis. Science Immunology, 2(15) (2017). [PubMed] [DOI]
- BioProject Accession: PRJNA396251
- Illumina NextSeq 2x150, mRNA
- Analysis scripts available
- DeKosky, BJ et al. High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire. Nature Biotechnology. 31(2):166-169 (2013).
- SRA Accession: SRA061316
- Illumina MiSeq 2x250, single cell emulsion PCR-linked heavy and light chain
- DeKosky, BJ et al. In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire. Nature Medicine. 21(1):86-91 (2015).
- SRA Accession: SRP047462
- Illumina MiSeq 2x250, single cell emulsion PCR-linked heavy and light chain
- Doria-Rose, N. et al. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature. 509(7498):55-62 (2014).
- Doria-Rose, N.A. et al. New member of the V1V2 directed CAP256-VRC26 lineage that shows increased breadth and exceptional potency. J. Virol. 90:1, 76 (2015).
- SRA Accession: SRR2126754, SRR2126755
- Roche 454, mRNA
- Feng, Y. et al. A mechanism for expansion of regulatory T-cell repertoire and its role in self-tolerance. Nature 528, 132–136 (2015).
- BioProject Accession: PRJNA290476, PRJNA290884
- Illumina MiSeq (TCR), Illumina HiSeq 2000 (RNA-seq), mRNA
- Freeman, J.D. et al. Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing. Genome Res., 19, 1817–24 (2009).
- SRA Accession: SRA008633
- Illumina GA II, mRNA, 5’RACE
- Greiff, V. et al. Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice. BMC Immunol. 15, 40 (2014).
[PubMed] [PMC] [DOI]- ENA Accession: PRJEB4643
- Species: Mus musculus (BALB/c)
- Illumina MiSeq 2x250, mRNA
- Greiff, V. et al. A bioinformatic framework for immune repertoire diversity profiling enables detection of immunological status. Genome Medicine, 7:49, (2015). [DOI]
- Data accession: Zenodo
- Species: Mus musculus (BALB/c)
- Illumina MiSeq 2x250, mRNA
- Greiff, V. et al. Systems Analysis Reveals High Genetic and Antigen-Driven Predetermination of Antibody Repertoires throughout B Cell Development. Cell Reports, 19, 1467–1478 (2015). [DOI]
- ENA accession: E-MTAB-5349
- Species: Mus musculus (C57BL/6, BALB/c, Pet store)
- Illumina MiSeq 2x300, mRNA
- Gupta, N. T. et al. Hierarchical Clustering Can Identify B Cell Clones with High Confidence in Ig Repertoire Sequencing Data. J. Immunol. 1601850 (2017).
- BioProject Accession: PRJNA349143
- Illumina MiSeq 2x300, mRNA, 5’RACE, 17bp UMI
- Halliley, JL et al. Long-Lived Plasma Cells Are Contained within the CD19(-)CD38(hi)CD138(+) Subset in Human Bone Marrow. Immunity 43:132-45 (2015).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA280743
- Species: Homo sapiens
- Illumina MiSeq + HiSeq 1000, mRNA
- Heather, J.M. et al. Dynamic Perturbations of the T-Cell Receptor Repertoire in Chronic HIV Infection and following Antiretroviral Therapy. Front. Immunol. 6:644 (2016).
[PubMed] [DOI]- BioProject Accession: PRJNA258001
- Species: Homo sapiens
- Illumina MiSeq, 250 bp, mRNA 5’ RACE, 12 bp UMI
- Hoehn, K. B. et al. Dynamics of immunoglobulin sequence diversity in HIV-1 infected individuals. Philos. Trans. R. Soc. B Biol. Sci. 370, 20140241 (2015).
- ENA Accession: ERP000572
- Illumina MiSeq 2x150, mRNA
- Huang, J et al. Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth. Immunity. 45(5):1108-1121 (2016).
- BioProject Accession: PRJNA347514
- Illumina MiSeq 2x300, mRNA, 5’RACE
- Jackson, K.J.L. et al. Human Responses to Influenza Vaccination Show Seroconversion Signatures and Convergent Antibody Rearrangements. Cell Host Microbe, 105–114 (2014).
- dbGaP Accession: phs000760.v1.p1
- Roche 454, gDNA
- Jiang, N. et al. Determinism and stochasticity during maturation of the zebrafish antibody repertoire. Proc. Natl. Acad. Sci. U. S. A. 108, 5348–53 (2011).
- SRA Accession: SRA029829
- Roche 454, mRNA
- Jiang, N. et al. Lineage structure of the human antibody repertoire in response to influenza vaccination. Sci. Transl. Med., 5, 171ra19 (2013).
- SRA Accession: SRA058972
- Roche 454, mRNA
- Joyce, M. G. et al. Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses. Cell. 166, 609-23 (2016).
[PubMed] [PMC] [DOI]- BioProject Accession (Roche 454): PRJNA209999
- BioProject Accession (Illumina MiSeq): PRJNA317685
- Species: Homo sapiens
- Roche 454, gDNA & mRNA; Illumina MiSeq 2x300 (?), mRNA, RACE
- Kaplinsky, J. et al. Antibody repertoire deep sequencing reveals antigen-independent selection in maturing B cells. Proc. Natl. Acad. Sci. 111, E2622–E2629 (2014).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA248676
- Species: Mus musculus
- Illumina MiSeq 2x150, gDNA
- Khan, T. et al. Accurate and predictive antibody repertoire profiling by molecular amplification fingerprinting. Science Advances, 2, e1501371 (2016). [DOI]
- BioProject accession: PRJNA311999
- Species: Mus musculus (BALB/c)
- Illumina MiSeq 2x300, mRNA
- Levin, M. et al. Persistence and evolution of allergen-specific IgE repertoires during subcutaneous specific immunotherapy. J Allergy Clin Immunol, 137, 1535-1544 (2015) [DOI]
- BioProject accession: PRJNA391821
- Species: Homo sapiens
- Roche 454, mRNA
- Levin, M. et al. Antibody-encoding repertoires produced by cells of bone marrow and peripheral blood - a focus on IgE. J Allergy Clin Immunol, 139, 1026-1030 (2017) [DOI]
- BioProject accession: PRJEB18926
- Species: Homo sapiens
- Illumina MiSeq 2x300, mRNA
- Liao, H.X. et al. Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus. Nature 496, 469 (2013).
[DOI] [PMC]- SRA Accession: SRP024276
- Roche 454, mRNA
- Lindner, C. et al. Diversification of memory B cells drives the continuous adaptation of secretory antibodies to gut microbiota. Nat. Immunol. 16, 880–888 (2015).
[PubMed] [DOI]- ENA Accession: PRJEB9386
- Species: Mus musculus
- Roche 454, mRNA
- Maceiras, A. R. et al. T follicular helper and T follicular regulatory cells have different TCR specificity. Nat Commun. 8:15067 (2017)
[PubMed] [DOI]- BioProject Accession: PRJNA362309
- Species: Mus musculus
- Illumia MiSeq 2x250, mRNA
- Madi, A. et al. T-cell receptor repertoires share a restricted set of public and abundant CDR3 sequences that are associated with self-related immunity. Genome Res. 24, 1603–1612 (2014).
- SRA Accession: SRP042610
- Illumina HiSeq 2000, mRNA
- Mamedov, I.Z. et al. Quantitative tracking of T cell clones after hematopoietic stem cell transplantation. EMBO Mol. Med. 3, 201-207 (2011).
[DOI] [PMC] [PubMed]- SRA Accession: SRP005664
- Roche 454, mRNA
- Martin, S.D. et al. Low mutation burden in ovarian cancer may limit the utility of neoantigen-targets vaccines. PLoS One, e0155189 (2016)
[DOI]- SRA Accession: SRP069102
- Illumina HiSeq 2000, mRNA
- Menzel, U. et al. Comprehensive Evaluation and Optimization of Amplicon Library Preparation Methods for High-Throughput Antibody Sequencing. PLoS One, e96727 (2014). [DOI]
- ENA Accession: E-MTAB-2226
- Species: Mus musculus (BALB/c)
- Illumina MiSeq 2x250, mRNA
- Michaeli, M. et al. Immunoglobulin gene repertoire diversification and selection in the stomach - from gastritis to gastric lymphomas. Front. Immunol. 5, 1–14 (2014).
- BioProject Accession: PRJNA206548
- Roche 454, gDNA
- Mroczek, E. S. et al. Differences in the Composition of the Human Antibody Repertoire by B Cell Subsets in the Blood. Front. Immunol. 5, 1–14 (2014).
- SRA Accession: SRP037774
- Roche 454, mRNA
- Ota, M. et al. Regulation of the B Cell Receptor Repertoire and Self-Reactivity by BAFF. J. Immunol. 185, 4128–4136 (2010).
[PubMed] [PMC] [DOI]- BioProject Accession: PRJNA79689
- Species: Mus musculus
- Roche 454, mRNA, 5’RACE
- Palanichamy, A. et al. Immunoglobulin class-switched B cells form an active immune axis between CNS and periphery in multiple sclerosis. Sci. Transl. Med. 6, 248ra106–248ra106 (2014).
- BioProject Accession: PRJNA248411
- Roche 454, mRNA
- Parameswaran, P. et al. Convergent Antibody Signatures in Human Dengue. Cell Host Microbe, 13, 691–700 (2013).
- BioProject Accession: PRJNA205206
- Roche 454, gDNA
- Pieper, K. et al. Public antibodies to malaria antigens generated by two LAIR1 insertion modalities. Nature, Letter, August 23, 2017.
[DOI]- BioProject Accession: PRJNA382214
- Illumina MiSeq, mRNA
- Putintseva, E. V et al. Mother and child T cell receptor repertoires: deep profiling study. Front. Immunol. 4, 463 (2013).
- BioProject Accession: PRJNA229070
- Illumina HiSeq 2000 2x100, mRNA
- Qi, Q. et al. Diversity and clonal selection in the human T-cell repertoire. Proc. Natl. Acad. Sci. U. S. A (2014).
- dbGap Accession: phs000787.v1.p1
- Illumina MiSeq 2x250, mRNA, 12bp UMI
- Roskin, K. M. et al. IgH sequences in common variable immune deficiency reveal altered B cell development and selection. Sci. Transl. Med. 7, 302ra135 (2015).
[PubMed] [PMC] [DOI]- dbGap Accession: phs000934.v1.p1
- Species: Homo sapiens
- Illumina MiSeq and Roche 454, mRNA and gDNA
- Rubelt, F. et al. Individual heritable differences result in unique Lymphocyte receptor repertoires of naïve and antigen-experienced cells. Nat. Commun. 6, 1–12 (2016).
- SRA Accession: SRP065626
- ImmPort Accession (processed data): SDY675
- Illumina MiSeq 2x300, mRNA, 5’RACE, 10bp UMI
- Schanz, M. et al. High-Throughput Sequencing of Human Immunoglobulin Variable Regions with Subtype Identification. PLoS ONE 9(11): e111726 (2014).
- Data Accession: doi:10.5281/zenodo.10863
- Species: Homo sapiens
- Illumina MiSeq 2x300, mRNA
- Shugay, M. et al. VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires. PLoS Comput. Biol. 11, 1–16 (2015).
- BioProject Accession: PRJNA280417
- Illumina HiSeq2500, mRNA, 5’RACE, 12bp UMI
- Sok, D. et al. The effects of somatic hypermutation on neutralization and binding in the PGT121 family of broadly neutralizing HIV antibodies. PLoS Pathog 9(11): e1003754 (2013).
[DOI]- CDR3 in paper and raw sequences: s3://hiv-antibody-data
- Roche 454, mRNA
- Soto, C et al. Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8. PLoS One. 11(6):e0157409 (2016).
- SRA Accession: SRP018335
- Roche 454, mRNA
- Stern, J. N. H. et al. B cells populating the multiple sclerosis brain mature in the draining cervical lymph nodes. Sci. Transl. Med. 6, 248ra107 (2014).
- BioProject Accession: PRJNA248475
- Illumina MiSeq 2x250, mRNA, 17bp UMI
- Sundling, C. et al. Single-Cell and Deep Sequencing of IgG-Switched Macaque B Cells Reveal a Diverse Ig Repertoire following Immunization. J. Immunol. 192, 3637–3644 (2014).
- SRA Accession: SRP033611
- Roche 454, mRNA
- Tian, M. et al. Induction of HIV Neutralizing Antibody Lineages in Mice with Diverse Precursor Repertoires. Cell. 166(6): 1471-1484 (2016).
[PubMed] [DOI]- BioProject Accesion: PRJNA327421
- Species: Mus musculus
- Illumina MiSeq 2x250, single cell emulsion PCR-linked heavy and light chain
- Tipton, C. M. et al. Diversity, cellular origin and autoreactivity of antibody-secreting cell population expansions in acute systemic lupus erythematosus. Nat. Immunol. (2015).
- SRA Accession: SRP057017
- Illumina MiSeq 2x250/2x300, mRNA
- Tran, E. et al. Cancer immunotherapy based on mutation-specific CD4+ T cells in a patient with epithelial cancer. Science 344, 641 (2014).
[DOI] [PubMed]- ImmunoSEQ (Adaptive Biotechnologies), mRNA
- SRA Accession: PRJNA243084
- Tsioris, K. et al. Neutralizing antibodies against West Nile virus identified directly from human B cells by single-cell analysis and next generation sequencing. Integr. Biol. 7, 1587–1597 (2015).
[DOI] [PMC]- dbGap Accession: phs001200.v1.p1
- Illumina MiSeq 2x150/2x300, mRNA, 5’RACE, 12/15bp UMI
- Turchaninova, M. et al. High-quality full-length immunoglobulin profiling with unique molecular barcoding. Nature Protocols 11, 1599–1616 (2016).
[PubMed] [DOI]- BioProject Accession: PRJNA297771
- Species: Homo sapiens
- Illumina MiSeq 350+300/400+100, mRNA, 5’RACE, 12bp UMI
- Vander Heiden, J. A. et al. Dysregulation of B Cell Repertoire Formation in Myasthenia Gravis Patients Revealed through Deep Sequencing. J. Immunol. 1601415 (2017).
[DOI] [PubMed]- BioProject Accession: PRJNA338795
- Illumina MiSeq 2x300, mRNA, 5’RACE, 17bp UMI
- Vergani, S. et al. Novel Method for High-Throughput Full-Length IGHV-D-J Sequencing of the Immune Repertoire from Bulk B-Cells with Single-Cell Resolution. Front Immunol. 8: 1157 (2017).
[DOI] [PMC]- BioProject Accession: PRJNA381394
- Illumina MiSeq, mRNA
- Vollmers, C. et al. Genetic measurement of memory B-cell recall using antibody repertoire sequencing. Proc. Natl. Acad. Sci. U. S. A., 110, 13463–8 (2013).
[DOI] [PMC]- dbGAP Accession: phs000656.v1.p1
- Illumina HiSeq2000 100+120, mRNA, 2x8bp UMI
- Vollmers, C. et al. Novel Exons and Splice Variants in the Human Antibody Heavy Chain Identified by Single Cell and Single Molecule Sequencing. PLoS One 10, e0117050 (2015).
[DOI] [PMC]- SRA Accession: SRP043513
- Illumina HiSeq2000, mRNA, PacBio, Sanger
- Wang, C. et al. High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets. Proc. Natl. Acad. Sci. U. S. A. 107, 1518–23 (2010).
[DOI] [PMC]- SRA Accession: SRA010149
- Roche 454, mRNA
- Wang, C. et al. Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires. J. Immunol., 192, 603–11 (2014).
[DOI] [PMC]- dbGAP Accession: phs000666.v1.p1
- Roche 454, gDNA/mRNA
- Wang, C. et al. B-cell repertoire responses to varicella-zoster vaccination in human identical twins. Proc. Natl. Acad. Sci. U. S. A. (2014).
[DOI] [PMC]- dbGAP Accession: phs000817.v1.p1
- Roche 454, gDNA/mRNA
- Wang, T. et al. The different T-cell receptor repertoirs in breast cancer tumors, draining lymph nodes, and adjacent tissues. AACR (2016).
[DOI]- SRA Accession: SRA455606
- Illumina HiSeq 2000, mRNA
- Warren, R.L. et al. Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes. Genome Res., 21, 790–7 (2011).
[DOI] [PMC]- SRA Accession: SRA020989
- Illumina GA IIx 2x100/2x150, mRNA, 5’RACE
- Weinstein, J. A. et al. High-throughput sequencing of the zebrafish antibody repertoire. Science (80-. ). 324, 807–10 (2009).
[DOI] [PMC]- SRA Accession: SRA008134
- Roche 454, mRNA
- Wesemann, D. R. et al. Microbial colonization influences early B-lineage development in the gut lamina propria. Nature 501, 112–5 (2013).
[DOI]- BioProject Accession: PRJNA212030
- Roche 454, mRNA
- Wu, X. et al. Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing. Science (80-. ). 333, 1593–602 (2011).
[DOI] [PMC]- SRA Accession: SRP006992
- Roche 454, mRNA
- Wu, X. et al. Maturation and Diversity of the VRC01-Antibody Lineage over 15 Years of Chronic HIV-1 Infection. Cell. 161(3):470-85 (2015).
[DOI] [PMC]- SRA Accession: SRP052625
- Roche 454, mRNA, VH1/VK-specific multiplex PCR
- Wu, Y.-C. B. et al. Influence of seasonal exposure to grass pollen on local and peripheral blood IgE repertoires in patients with allergic rhinitis. J. Allergy Clin. Immunol. 134, 604–612 (2014).
[DOI] [PMC]- SRA Accession: SRP038092
- Roche 454, mRNA
- Zhou, T. et al. Multi-donor Analysis Reveal Structural Elements, Genetic Determinants, and Maturation Pathway for Effective HIV-1 Neutralization by VRC01-class Antibodies. Immunity. 39, 245-258 (2013).
[DOI] [PMC]- SRA Accession: SRA072279
- Roche 454, mRNA
- Zhou, T. et al. Structural repertoire of HIV-1 neutralizing antibodies targeting the CD4 supersite in 14 donors. Cell, 6 1280-1292 (2015).
[DOI]- SRA Accession: SRP055520
- Roche 454, gDNA
- Zhu, J. et al. Somatic Populations of PGT135-137 HIV-1-Neutralizing Antibodies Identified by 454 Pyrosequencing and Bioinformatics. Frontiers in Microbiology. 3, 315 (2012).
[DOI] [PMC]- SRA Accession: SRA055820
- Roche 454, mRNA
- Zhu, J. et al. Mining the antibodyome for HIV-1-neutralizing antibodies with next-generation sequencing and phylogenetic pairing of heavy/light chains. Proc. Natl. Acad. Sci. U. S. A. 110, 6470–5 (2013).
[DOI] [PMC]- SRA Accession: SRP018335
- Roche 454, mRNA
- Zhu, J. et al. De novo identification of VRC01 class HIV-1-neutralizing antibodies by next-generation sequencing of B-cell transcripts. PNAS. 110, 4088-4097 (2013).
[DOI] [PMC]- SRA Accession: SRP026397
- Roche 454, mRNA
- Zvyagin, I. V. et al. Distinctive properties of identical twins’ TCR repertoires revealed by high-throughput sequencing. Proc. Natl. Acad. Sci. U. S. A. 111, 5980–5 (2014).
[DOI] [PMC]- SRA Accession: SRP028752
- Species: HomoSapiens
- Illumina GA IIx 2x125, mRNA
- Zvyagin, I. V. et al. Tracking T-cell immune reconstitution after TCRαβ/CD19-depleted hematopoietic cells transplantation in children. Leukemia. 5, 1145-53 (2017).
[DOI] [PubMed]- SRA Accession: SRP070495
- BioProject Accession: PRJNA312319
- Species: HomoSapiens
- Illumina HiSeq2500 2x100, mRNA, 5’RACE, UMI